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Synthetic Modeling and Mechanistic Account:Material Recombination and Beyond
Dynamic mechanistic explanations mathematical models synthetic models genetic circuits noise modularity integration
2016/5/30
Recently, Bechtel and Abrahamsen have argued that mathematical models study the dynamics of mechanisms by recomposing the components and their operations into an appropriately organized system. We wil...
The notion of (computational) template has recently been discussed in relation to cross-disciplinary transfer of modeling efforts and in relation to the representational content of models. We further ...
Modeling and Experimenting
Models Modeling Experiments Data
2009/9/17
Experimental activity is traditionally identified with testing the empirical implications or numerical simulations of models against data. In critical reaction to the ‘tribunal view’ on experiments, t...
Making Sense of Modeling: Beyond Representation
models modeling use epistemic value fluid mechanics
2009/9/17
It has recently been aptly emphasized that how models are used is essential to what scientific models are. But the explanations of why and how a model is used or why a model is scientifically valuable...
Theoretical technologies in an “experimental” setting: empirical modeling of proteinic objects and simulation of their dynamics within scientific collaborations around a supercomputer
biophysics protein chemistry models simulation experimental data
2009/9/8
This paper examines, as a case study, some modeling and simulating practices in protein chemistry. In this field, theorists try to grasp proteinic objects by constructing models of their structures an...
Global Climate Modeling as Applied Science
Global Climate Models applied science simulations
2009/3/31
In this paper I argue that the appropriate analogy for “understanding what makes simulation results reliable” in Global Climate Modeling is not with scientific experimentation or measurement, but—at l...
Modeling Partially Reliable Information Sources: a General Approach based on Dempster-Shafer Theory
Dempster-Shafer Theory Probabilistic Argumentation
2008/4/15
Combining testimonial reports from independent and partially reliable information sources is an important problem of uncertain reasoning. Within the framework of Dempster-Shafer theory, we propose a g...
Reason out Emergence from Cellular Automata Modeling
Reason out Emergence Cellular Automata Modeling
2008/3/29
In this paper, we first construct a descriptive definition for emergencebased on multilevel ontology, and then use Cellular Automata Modeling to simulatesome classical emergent processes, such as Conw...