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In a cocaine dependence treatment study, we have paired binary longitudinal tra-jectories that record the cocaine use patterns of each patient before and after a treat-ment. To better understand the d...
In a cocaine dependence treatment study, we have paired binary longitudinal tra-jectories that record the cocaine use patterns of each patient before and after a treat-ment. To better understand the d...
The goal of network clustering algorithms is to detect dense clusters in a network, which provides a first step towards the understanding of large scale biological networks. With numerous recent advan...
Convex optimization is an essential tool for modern data analysis, as it provides a framework to formulate and solve many problems in machine learning and data mining. However, general convex optimiza...
Interrelated Two-way Clustering (ITC) is an unsupervised clustering method developed to divide samples into two groups in gene expression data obtained through microarrays, selecting important genes s...
Many machine learning algorithms assume that all input samples are independently and identically distributed from some common distribution on either the input space X, in the case of unsupervised lear...
This paper presents a novel algorithm, based upon the dependent Dirichlet process mixture model (DDPMM), for clustering batch-sequential data containing an unknown number of evolving clusters. The alg...
Clustering methods have led to a number of important discoveries in bioinformatics and beyond. A major challenge in their use is determining which clusters represent important underlying structure, as...
We developed a new quantum annealing (QA) algorithm for Dirichlet process mixture (DPM) models based on the Chinese restaurant process (CRP). QA is a parallelized extension of simulated annealing (SA)...
We consider the problem of clustering noisy high-dimensional data points into a union of low-dimensional subspaces and a set of outliers. The number of subspaces, their dimensions, and their orientati...
As data sets continue to grow in size and complexity, effective and efficient techniques are needed to target important features in the variable space. Many of the variable selection techniques that a...
Unions of subspaces are powerful nonlinear signal models for collections of high-dimensional data. However, existing methods that exploit this structure require that the subspaces the signals of inter...
We consider the problem of clustering a set of high-dimensional data points into sets of low-dimensional linear subspaces. The number of subspaces, their dimensions, and their orientations are unknown...
The fundamental aim of clustering algorithms is to partition data points. We consider tasks where the discovered partition is allowed to vary with some covariate such as space or time. One approach wo...
The stochastic block model (SBM) is a mixture model used for the clustering of nodes in networks. It has now been employed for more than a decade to analyze very different types of networks in many sc...

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